Mask segments that have a too high CN state

Mask segments that have a too high CN state

mask_high_cn_segments(subclones, bafsegmented, max_allowed_state)

Arguments

subclones

Subclones output data

bafsegmented

BAFsegmented data

max_allowed_state

The maximum state allowed before overruling takes place

Value

A list with the masked subclones, bafsegmented and the number of segments masked and their total genome size

Author

sd11